medkit.tools.mtsamples

This module aims to provide facilities for accessing some examples of mtsamples files available on this repository: neurazlab/mtsamplesFR

Refer to the repository for more information.

This repository contains:

• a version of mtsamples.csv

  Source: https://www.kaggle.com/datasets/tboyle10/medicaltranscriptions license: CC0: Public Domain

• a mtsamples_translation.json file which is a translation to french

Date: 08/04/2022

Functions:

convert_mtsamples_to_medkit(output_file[, ...])	Convert mtsamples data into a medkit file
load_mtsamples([cache_dir, translated, nb_max])	Function loading mtsamples data into medkit text documents

load_mtsamples(cache_dir='.cache', translated=True, nb_max=None)

Function loading mtsamples data into medkit text documents

Parameters:

• cache_dir (str or Path, default=".cache") – Directory where to store mtsamples file. Default: .cache

• translated (bool, default=True) – If True (default), mtsamples_translated.json file is used (FR). If False, mtsamples.csv is used (EN)

• nb_max (int, optional) – Maximum number of documents to load

Return type:

list[TextDocument]

Returns:

list of TextDocument – The medkit text documents corresponding to mtsamples data

convert_mtsamples_to_medkit(output_file, encoding='utf-8', cache_dir='.cache', translated=True)

Convert mtsamples data into a medkit file

Parameters:

• output_file (str or Path) – Path to the medkit jsonl file to generate

• encoding (str, default="utf-8") – Encoding of the medkit file to generate

• cache_dir (str or Path, default=".cache") – Directory where mtsamples file is cached. Default: .cache

• translated (bool, default=True) – If True (default), mtsamples_translated.json file is used (FR). If False, mtsamples.csv is used (EN)